bioneuralnet.downstream_task.dpmon

Functions

build_omics_networks_tg(adjacency_matrix, ...)
run_hyperparameter_tuning(dpmon_params, ...)
run_standard_training(dpmon_params, ...)
setup_device(gpu, cuda)
slice_omics_datasets(omics_dataset, ...)
train_model(model, criterion, optimizer, ...)

Classes

Autoencoder(input_dim, encoding_dim)
DPMON(adjacency_matrix, omics_list, ...[, ...])
DimensionAveraging()
DownstreamTaskNN(input_size, hidden_dim1, ...)
NeuralNetwork(model_type, gnn_input_dim, ...)